PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16057
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bZIP
Protein Properties Length: 178aa    MW: 20125.8 Da    PI: 9.6306
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16057genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.9e-111967553
              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
              kr +r   NR +A rs +RK  +i eLe+kv+ L++e ++L+ +++ l+
  EMT16057 19 KRVKRVLANRQSAARSKERKMRYIVELEQKVQILQTEATTLAAQINLLQ 67
              999****************************************999885 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-121589IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.9671767IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-111967No hitNo description
PfamPF001704.9E-101966IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.4E-111967No hitNo description
CDDcd147037.17E-172067No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MKKIMADEKL AEMALADPKR VKRVLANRQS AARSKERKMR YIVELEQKVQ ILQTEATTLA  60
AQINLLQLTD GSNSMAQRDS SAVATQNNEL RFRLQAMEQQ AQLRDALNDA LTGEVQRLKI  120
AAVELGIGDS CSSNAMAQQH NLMFQHQQLQ ATPIPFYQLQ HQQQQQQNGT ANKHESRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9715099e-73EU971509.1 Zea mays clone 366380 DNA binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985885.17e-81PREDICTED: transcription factor RF2b-like
SwissprotQ6S4P43e-47RF2B_ORYSJ; Transcription factor RF2b
TrEMBLN1QYZ21e-127N1QYZ2_AEGTA; Transcription factor RF2b
STRINGSi035841m2e-80(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35363576
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.33e-55bZIP family protein